Amgen seeks a Bioinformatics & AI Engineer in Hyderabad to develop and deploy deep learning systems for biomarker discovery and clinical development. The role combines machine learning, bioinformatics, and software engineering to translate genomic and multi-omics data into scientific capabilities across precision medicine applications.

Responsibilities

Design, develop, and validate foundation-model applications for genomics, multi-omics, imaging, and clinical data analysis
Build reproducible data pipelines with curation, harmonization, versioning, quality controls, and access governance
Engineer agentic workflows combining foundation models with bioinformatics tools, structured knowledge, and human review
Define benchmarking strategies assessing biological relevance, robustness, bias, uncertainty, and reproducibility of AI systems
Develop production-ready cloud and GPU-based services optimizing performance, cost, reliability, and monitoring

Requirements

Master's or PhD in Bioinformatics, Computational Biology, Computer Science, Machine Learning, Statistics, or related discipline
7+ years hands-on experience building bioinformatics, machine learning, or research software; biomedical AI experience strongly preferred
Strong Python programming with software engineering practices: Git, testing, CI/CD, documentation
Deep expertise with deep learning, transformers, foundation models, and inference optimization
Hands-on experience with biological foundation models, LLMs, and retrieval-augmented generation systems
Proficiency with Hugging Face, AWS SageMaker, workflow engines like Nextflow or Snakemake, Docker/containers
Strong knowledge of genomics, transcriptomics, single-cell omics, proteomics, or biomedical imaging data modalities

Bioinformatics & AI Engineer

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